(**committee chair, *on SFSU geography committee, ***on PhD committee)

Campbell, E, Alfaro-Shigueto, J, and others (including E. Hines).  2022. Challenges and priorities for river cetacean conservation.  Endangered Species Research. https://doi.org/10.3354/esr01201

Sullivan-Stack, J., and others (including E. Hines).  2022.  A Scientific Synthesis to Inform Effective Protected Areas in the U.S. Ocean, Frontiers in Marine Science https://doi.org/10.3389/fmars.2022.849927

Peter, C., Mustika, PL, Acebes, JMV, Chansue, N., Dolar, L, Ham, GS, Hines, E, Hte, W, Minton, G, Ponnampalam, LS, Porter, L, Vu, L, Westerlaken, R, Htay, YY, Whitty, TS.  In Press.  Commentary on Coram et al. (2021) on the use of Facebook to understand marine mammal stranding issues in Southeast Asia.  Biodiversity and Conservation https://doi.org/10.1007/s10531-021-02196-6

Seher, VL*, Holzman, BA, Hines, E, Bradley, RW, Warzybok, P, and BH Becker.  2022. Ocean-influenced estuarine habitat buffers high interannual variation in seabird reproductive success. Marine Ecology Progress Series https://doi.org/10.3354/meps14028

Anderson, R.**, Hines, E., Mazzini, P.L.F., Elliot, M., Largier, J.L., and J. Jahncke.  2022. Spatial patterns in aragonite saturation horizon over the northern California shelf. Regional Studies in Marine Science https://doi.org/10.1016/j.rsma.2022.102286

Costanza, AB**, Guidino, C, Mangel, JC, Alfaro-Shigueto, J, Verutes, G, Caillat, M, Samanta, A, and Hines, E.  2021.  Participatory Risk Assessment of Humpback Whale (Megaptera novaeangliae) and Leatherback Turtle (Dermochelys coriacea) Bycatch in Northern Peru. Frontiers in Marine Science  https://doi.org/10.3389/fmars.2021.776965

McGowen, MR, Vu, L, Potter, CW, Tho, TA, Jefferson, TA, Kuit, SH, Abdel-Raheem, ST**, and Hines, E. 2021  Whale temples are unique repositories for understanding marine mammal diversity in central Vietnam.  Raffles Bulletin of Zoology 69:481-496 https://doi.org/10.26107/RBZ-2021-0066

Ham, GS, LaHaye, E, Rosso, M, Moulins, A, Hines, E, and Tepsich, P. 2021.  Predicting summer fin whale distribution in the Pelagos Sanctuary to identify dynamic whale-vessel collision risk areas.  Aquatic Conservation 1-21.  https://doi.org/10.1002/aqc.3614

Ingman, K.**, Hines, E., Mazzini P., Rockwood, C., Nur, N., and J. Jahncke. 2021. Modeling changes in baleen whale seasonal abundance, timing of migration, and environmental variables to explain the sudden rise in baleen whale entanglements in central California.  PLoS One 16: e0248557. https://doi.org/10.1371/journal.pone.0248557

Cope, S **, Hines, E, Bland, R, Davis, JD, Tougher, B, Zetterlind, V.  2021.  Multi-sensor integration for an assessment of underwater radiated noise from common vessels in San Francisco Bay. Journal of the Acoustical Society of America. https://doi.org/10.1121/10.0003963

Backe, K. **, Hines, E., Nielsen, K., George, D., Twohy, E., and M. Lowry.  2021. Effects of sea-level rise and storm enhanced flooding on Pacific harbor seal habitat: a comparison of haul-out changes at the Russian and Eel River Estuaries.  Aquatic Conservation https://doi.org/10.1002/aqc.3574

Nelms, SE, and others (including Hines, EM).  2021. Marine mammal conservation: Over the horizon.  Endangered Species Research: https://doi.org/10.3354/esr01115

Studwell, A**, Hines, E., and others. 2020.  Using habitat risk assessment to assess disturbance from maritime activities to inform seabird conservation in a coastal marine ecosystem.  Ocean and Coastal Management: https://doi.org/10.1016/j.ocecoaman.2020.105431

Rudebusch J**, Hughes BB, Boyer KE, Hines E. 2020. Assessing anthropogenic risk to sea otters (Enhydra lutris nereis) for reintroduction into San Francisco Bay. PeerJ 8:e10241 https://doi.org/10.7717/peerj.10241

Lynch, P.*, Blesius, L., and E. Hines. 2020 Four new methodologies for classifying urban land use types with landsat data. Remote Sensing https://doi.org/10.3390/rs12152503

Vu, L., McGowen, M.R., Potter, C., Tho, T.A., Kuit, S.H., Abdel-Raheem, S.**, and EM Hines.  2020.  New records of Fraser’s dolphin (Lagenodelphis hosei) from the whale temples of Vietnam. Aquatic Mammals DOI 10.1578/AM.46.4.2020.395

Verutes, GM, Johnson, AF, Caillat, M, Ponnampalam, LS, Peter, C, Vu, L, Junchompoo, C, Lewison, RL, and Hines, EM.  2020. Using GIS and stakeholder involvement to innovate marine mammal bycatch risk assessment in data-limited fisheries. PLoS ONE https://doi.org/10.1371/journal.pone.0237835

Hines, EM, Johnson, A., Ponnampalam, L., Peter, C., Junchompoo, C., Vu, L., Thien, H., Caillat, M., and Verutes, C. (2020) Getting to the Bottom of Bycatch: A GIS-based toolbox to assess the risk of marine mammal bycatch.  Endangered Species Research: https://doi.org/10.3354/esr01037

Greig, N.**, Hines, E., and XH Liu. Using satellite AIS to analyze vessel speeds off the coast of Washington state as a risk analysis for cetacean-vessel collision. Frontiers in Marine Science: https://doi.org/10.3389/fmars.2020.00109
 
Cope, S. J.**, Hines, E., Bland, R., Davis, J., Tougher, B., and V. Zetterlind. 2020. Application of a new shore-based vessel traffic monitoring system for marine conservation in San Francisco Bay. Frontiers in Marine Science: https://doi.org/10.3389/fmars.2020.00086
 
Hughes, B. B., Wasson, K., Tinker, T. M., Williams, S. L., Carswell, L. P., et al including Hines, E. and Rudebusch, J.**. 2020. Sea otters in estuaries: opportunities for recovery and restoration: Recovering sea otters reveal their true fundamental niche. PeerJ: http://dx.doi.org/10.7717/peerj.8100 
 
Jackson-Ricketts, J. ***, Junchompoo, C., Hines, EM, Hazen, E, Ponnampalam, L, Ilangakoon, A, Monanunsap, S. 2020. Habitat modeling of Irrawaddy dolphins (Orcella brevirostris) in the eastern Gulf of Thailand. Ecology and Evolution: https://doi.org/10.1002/ece3.6023
 
Jackson-Ricketts, J.***, Ruiz-Cooley, R.I., Junchompoo, C., Thongsukdee, S., Intongkham, A., Ninwat, S., Kittiwattanawong, K., Hines, E.M., and D. P. Costa. 2018. Diet and Life History of Irrawaddy Dolphins (Orcaella brevirostris) in the Gulf of Thailand and the Andaman Sea. Marine Mammal Science https://doi.org/10.1111/mms.12547
 
Caballero, S., Dove, V., Jackson-Ricketts, J.***, Junchompoo, C, Cohen, S. and E. Hines. (2018)
Mitochondrial DNA diversity and population structure in the Irrawaddy dolphin
(Orcaella brevirostris) from the Gulf of Thailand and the Mekong River: should we start thinking about genetic rescue? Marine Mammal Science https://doi.org/10.1111/mms.12518
 
Gallagher, C.**, Stern, J., and E. Hines. (2018) The metabolic cost of swimming and reproduction of harbor porpoises (Phocoena phocoena) as predicted by a bioenergetics model. Marine Mammal Science https://doi.org/10.1111/mms.12487
 
Pilcher, NJ, Adulyanukosol, K., Das, H., Davis, P., Hines, E., Kwan, D., Marsh, H., Ponnampalam, L., and J. Reynolds (2017). A low-cost solution for documenting distribution and abundance of endangered marine fauna and impacts from fisheries. PLoS ONE https://doi.org/10.1371/journal.pone.0190021
 
Johnson, AF, Caillat, M., Verutes, GM, Peter, C., Junchumpoo, C., Long, V., Ponnampalam, LS., Lewison, RL., and EM Hines. (2017) Poor fisheries struggle with U.S. import rule. Science, 355: 1031.
 
Studwell AJ**, Hines E, Elliott ML, Howar J, Holzman B, et al. (2017) Modeling Nonresident Seabird Foraging Distributions to Inform Ocean Zoning in Central California. PLOS ONE 12(1): e0169517. doi: 10.1371/journal.pone.0169517
 
Baldwin, C., Lewison, R., Lieske, S., Beger, M., Jones, C., Hines, E., Junchompoo, C, Satumanatpan, S. 2016. Using the Driver Pressure State Impact Response (DPSIR) framework for transdisciplinary and cross-border training and knowledge elicitation: social-ecological dynamics in the eastern Gulf of Thailand. Ocean and Coastal Management 134: 163-172.
 
Ballenti, L*., Blesius, L, Hines, E., Kruse, B. 2016. Tree species classification using hyperspectral imagery: A comparison of two classifiers. Remote Sensing 8, 445; doi:10.3390/rs8060445
 
Lewison, R. L, Rudd, M.A., Al-Hayek, W., Baldwin, C., Beger, M., Lieskee, S. N., Jones, C., Suvaluck, Satumanatpan, S., Junchompoo, C., and E. Hines. 2016. How the DPSIR framework can be used for structuring problems and facilitating empirical research in coastal systems. Environmental Science & Policy 56: 110-119.
 
McClure, A*., Liu, XH, Hines, E. and M. Ferner. 2016. Evaluation of error reduction techniques on a lidar-derived salt marsh digital elevation model. Journal of Coastal Research 32: 424-433.
 
Smith, T.D., Bannister, J., Hines, E., Reeves, R., Rojas-Bracho, L., and P. Shaughnessy (2016). World Ocean Assessment, Chapter 37: Marine Mammals. The Division of Ocean Affairs and Law of the Sea of the United Nations Secretariat http://www.un.org/depts/los/global_reporting/WOA_RegProcess.htm
 
Wedding, L. M, Maxwell, D. Hyrenbach, DC Dunn, J. Roberts, S., D. Briscoe, E. Hines, and PN Halpin. 2015. Geospatial approaches to support pelagic conservation planning and adaptive management. Endangered Species Research DOI:10.3354/esr00716
 
Jensen, C**., E. Hines, B. Holzman, TJ Moore, J. Jahncke and JV Redfern, et al. 2015. Spatial and temporal variability in shipping traffic entering and exiting San Francisco Bay. Coastal Management 43: 575-588. http://dx.doi.org/10.1080/08920753.2015.1086947
 
Hines, E., et al. 2015. In Memoriam, Kanjana Adulyanukosol. Marine Mammal Science DOI: 10.1111/mms.12265
 
Hines, E., Strindberg, S., Jumchumpoo, C., Ponnampalam, L, Ilangakoon, A., and J. Jackson-Ricketts. 2015. Line transect estimates of Irrawaddy dolphin abundance along the eastern Gulf of Thailand. Frontiers in Marine Science doi: 10.3389/fmars.2015.00063
 
Teh, SLL, Teh, CLL, Hines, E., Junchumpoo, C., and R. Lewison. 2015. Contextualizing the coupled socio-ecological conditions of marine megafauna bycatch. Ocean and Coastal Management 116: 449-465.
 
Dransfield, A,** E Hines, B Holzman, M. Elliot, J. Howar, J.McGowan, N. Nur, JJahncke. 2014. Where the Whales are: Using habitat modeling to support changes in shipping regulations within National Marine Sanctuaries in Central California. Endangered Species Research: 26:39-57. doi: 10.3354/esr00627
 
Edwards, H. H.,Stone, S. B. P.**, Hines, E. M., Gomez, N.A., and B. E. Winning. 2014. Documenting manatee (Trichechus manatus manatus) presence at Turneffe Atoll in Belize and its conservation significance, Central America. Caribbean Journal of Science 48: 71-75.
 
Briscoe, D.K., S. Hiatt, R. Lewison and E. Hines. 2014. Modeling habitat and bycatch risk for dugongs in Sabah, Malaysia. Endangered Species Research 24:237-247. doi: 10.3354/esr00600
 
Ponnampalam, L., Hines, E., Mananansap, S., Ilangakoon, A., Junchompoo, C., Adulyanukosol, A., and L. J. Morse. 2013. Behavioral observations on Irrawaddy dolphins (Orcaella brevirostris) in Trat Province, Eastern Gulf of Thailand. Aquatic Mammals 39(4): 401-409.
 
McGowan, J.**, E. Hines, M. Elliott, J.Howar, A. Dransfield, N. Nur, J Jahncke. 2013. Using seabird habitat modeling to inform marine spatial planning in Central California’s National Marine Sanctuaries, PLoS ONE 8(8): e71406. doi:10.1371/journal.pone.0071406.
 
Funayama, K**., Hines, E., Davis, J, and S. Allen. 2013. Effects of sea-level rise on northern elephant seals at Point Reyes peninsula, California. Aquatic Conservation: Marine and Freshwater Ecosystems: 23: 233-245.